Follow

Keep Up to Date with the Most Important News

By pressing the Subscribe button, you confirm that you have read and are agreeing to our Privacy Policy and Terms of Use
Contact

combinining multiple summarize calls dplyr

Given the df

ww <- data.frame(
    GM = c("A", "A", "A", "A", "A", "A",
            "B", "B", "B", "B", "B", "B",
            "C", "C", "C", "C", "C", "C"),
    stanza = rep(c("Past", "Mid", "End"), 6),   
    change = c(1, 1.1, 1.4, 1, 1.3, 1.5, 1, 1.2, 1.4,
               1.1, 1.2, 1.3, .9, 1.2, 1.3, .9, 1.3, 1.5))

I would like to calculate the mean for Past for each GM and the divide each value in ‘change’ by the GM specific mean. I can do this with two dplyr calls and a join function as follows:

past <- ww %>%
    group_by(GM) %>%
    filter(stanza == "Past") %>%
    summarize(past.mean = mean(change))

ww <- left_join(ww, past, by = "GM")

ww %>%
    group_by(GM, stanza) %>%
    summarize(pr.change = change/past.mean)

But there must be a way to do this in one dplyr call.

MEDevel.com: Open-source for Healthcare and Education

Collecting and validating open-source software for healthcare, education, enterprise, development, medical imaging, medical records, and digital pathology.

Visit Medevel

>Solution :

No need to join, you can compute this directly in one pipe chain:

ww %>% 
  group_by(GM) %>% 
  mutate(pr.change = change / mean(change[stanza == "Past"])) %>%
  ungroup()

Output

   GM    stanza change pr.change
   <chr> <chr>   <dbl>     <dbl>
 1 A     Past      1       1    
 2 A     Mid       1.1     1.1  
 3 A     End       1.4     1.4  
 4 A     Past      1       1    
 5 A     Mid       1.3     1.3  
 6 A     End       1.5     1.5  
 7 B     Past      1       0.952
 8 B     Mid       1.2     1.14 
 9 B     End       1.4     1.33 
10 B     Past      1.1     1.05 
11 B     Mid       1.2     1.14 
12 B     End       1.3     1.24 
13 C     Past      0.9     1    
14 C     Mid       1.2     1.33 
15 C     End       1.3     1.44 
16 C     Past      0.9     1    
17 C     Mid       1.3     1.44 
18 C     End       1.5     1.67 
Add a comment

Leave a Reply

Keep Up to Date with the Most Important News

By pressing the Subscribe button, you confirm that you have read and are agreeing to our Privacy Policy and Terms of Use

Discover more from Dev solutions

Subscribe now to keep reading and get access to the full archive.

Continue reading